Illumina sequencing of Giardia duodenalis: isolate P424 - SRA

SRX17531995: Illumina sequencing of Giardia duodenalis: isolate P424
1 ILLUMINA (Illumina HiSeq 2000) run: 1.4M spots, 686.7M bases, 423.4Mb downloads

Design: Dual-indexed paired-end libraries were constructed using Nextera Library Prep kit (Illumina) from fragmented DNA. Average sample length of libraries was approximately 600-1000 bp

Submitted by: Robert Koch-Institut

Study: Generation of highly contiguous genomes of Giardia duodenalis isolates

PRJNA879307 • SRP396690 • All experiments • All runs

show Abstracthide Abstract

High-quality genome data sets for Giardia duodenalis are scarce. Here, we generated highly contiguous genomes by a hybrid PacBio/Illumina sequencing approach of four assemblage A (one AI from a cat, and three AII from humans) and five assemblage B isolates (from humans) derived by axenic culture from clinical samples.

Sample: Host was Homo sapiens

SAMN30804749 • SRS15080483 • All experiments • All runs

Organism: Giardia intestinalis

Library:

Name: P424-A5-shortReads-2

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 1.4M spots, 686.7M bases, 423.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR21529635	1,365,222	686.7M	423.4Mb	2022-10-04

ID:: 24410291

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